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Contents

  • gwaslab
  • locuszoom
  • pheweb
  • gwas diversity monitor
  • Geography of Genetic Variants Browser - popgen
  • CMplot

gwaslab

  • SHORT NAME:gwaslab
  • FULL NAME:gwaslab
  • YEAR:2022
  • URL :https://github.com/Cloufield/gwaslab

locuszoom

  • SHORT NAME:locuszoom
  • FULL NAME:locuszoom
  • YEAR:2010
  • DESCRIPTION:
  • URL :http://locuszoom.org/
  • CITATION:Pruim, Randall J., et al. "LocusZoom: regional visualization of genome-wide association scan results." Bioinformatics 26.18 (2010): 2336-2337.

gwas diversity monitor

  • SHORT NAME:gwas diversity monitor
  • FULL NAME:gwas diversity monitor
  • YEAR:2020
  • DESCRIPTION:
  • URL : http://www.gwasdiversitymonitor.com/
  • CITATION:Mills, Melinda C., and Charles Rahal. "The GWAS Diversity Monitor tracks diversity by disease in real time." Nature genetics 52.3 (2020): 242-243.
  • KEY WORDS:Diversity

Geography of Genetic Variants Browser - popgen

  • SHORT NAME:GGV
  • FULL NAME:Geography of Genetic Variants Browser
  • YEAR:2017
  • DESCRIPTION:the Geography of Genetic Variants (GGV) browser provides maps of allele frequencies in populations distributed across the globe.
  • URL : https://popgen.uchicago.edu/ggv/
  • CITATION:Marcus, Joseph H., and John Novembre. "Visualizing the geography of genetic variants." Bioinformatics 33.4 (2017): 594-595.

pheweb

  • SHORT NAME: PheWeb
  • FULL NAME: PheWeb
  • YEAR:2020
  • DESCRIPTION:an easy-to-use open-source web-based tool for visualizing, navigating and sharing GWAS and PheWAS results
  • URL :https://github.com/statgen/pheweb
  • CITATION:Gagliano Taliun, Sarah A., et al. "Exploring and visualizing large-scale genetic associations by using PheWeb." Nature Genetics 52.6 (2020): 550-552.

CMplot

  • URL: https://github.com/YinLiLin/CMplot
  • CITATION: Yin, L., Zhang, H., Tang, Z., Xu, J., Yin, D., Zhang, Z., ... & Liu, X. (2021). rMVP: a memory-efficient, visualization-enhanced, and parallel-accelerated tool for genome-wide association study. Genomics, proteomics & bioinformatics, 19(4), 619-628.